After building R with GotoBLAS (See http://jychoi-report-cgl.blogspot.com/2009/04/compile-r-with-gotoblas.html), a few things we can do for verification.
1. Download a R benchmark script (http://r.research.att.com/benchmarks/R-benchmark-25.R) and run it to check if every step works ok. (You can compare the performance with ones from normal R build too.)
2. If R is hang in calling eigen() function, try to rebuild GotoBLAS and R by using the same fortran compiler.
3. If nothing works, one can use ATLAS instead of GotoBLAS
2 comments:
Oh, the benchmark link is really helpful. Thanks!
By the way, I am curious about what results you got?
Post a Comment